Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm17221-201ENSMUST00000163909 481 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm17073-201ENSMUST00000168069 556 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm9162-201ENSMUST00000182081 991 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm26976-201ENSMUST00000182929 908 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm44323-201ENSMUST00000198689 129 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm7525-201ENSMUST00000219425 454 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Paupar-201ENSMUST00000194826 3482 ntBASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Snrnp40Q6PE01 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm6158-201ENSMUST00000109467 904 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm14071-201ENSMUST00000117817 509 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm8302-201ENSMUST00000119217 852 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm14165-201ENSMUST00000121456 952 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm24992-201ENSMUST00000157412 130 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm21778-201ENSMUST00000178779 471 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm42660-201ENSMUST00000197733 947 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm44124-201ENSMUST00000204159 472 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm43969-201ENSMUST00000204833 535 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm9487-201ENSMUST00000216600 472 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Snrnp40Q6PE01 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms