Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Gm23908-201ENSMUST00000104599 132 ntBASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Gm44498-201ENSMUST00000199509 111 ntBASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Elobl-202ENSMUST00000082339 300 ntBASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.08□□□□□ -0.64
Vps13aQ5H8C4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm17147-201ENSMUST00000164176 432 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Snord55-201ENSMUST00000174939 79 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm37688-201ENSMUST00000195195 465 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm37597-201ENSMUST00000191853 382 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm45225-201ENSMUST00000206852 1139 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.07□□□□□ -0.64
Vps13aQ5H8C4 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm8163-201ENSMUST00000122020 1060 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm13777-201ENSMUST00000118208 345 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm15476-201ENSMUST00000118247 1191 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm12463-201ENSMUST00000118271 849 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm19246-201ENSMUST00000173599 255 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm22616-201ENSMUST00000179783 100 ntBASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vps13aQ5H8C4 Gm4866-201ENSMUST00000197408 589 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms