Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Shisa3Q3UPR0 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm11222-201ENSMUST00000119005 738 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm15610-201ENSMUST00000120584 195 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm14999-201ENSMUST00000121039 624 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm12164-201ENSMUST00000121695 551 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm7584-201ENSMUST00000175829 940 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm26956-201ENSMUST00000182176 986 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm37201-201ENSMUST00000191845 523 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm7783-201ENSMUST00000204795 781 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm21769-201ENSMUST00000211922 111 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Shisa3Q3UPR0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm13350-201ENSMUST00000120519 479 ntBASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm27023-201ENSMUST00000182372 285 ntBASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm4870-201ENSMUST00000198525 1251 ntBASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.03□□□□□ -0.8
Shisa3Q3UPR0 Gm30285-201ENSMUST00000214614 422 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms