Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Gm9136-201ENSMUST00000193368 454 ntBASIC11.72□□□□□ -0.53
Ebf1Q07802 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Gm3619-201ENSMUST00000219947 775 ntBASIC11.72□□□□□ -0.53
Ebf1Q07802 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ebf1Q07802 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm25063-201ENSMUST00000104666 94 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm12419-201ENSMUST00000116649 636 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm11783-201ENSMUST00000119549 885 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm15744-201ENSMUST00000161734 213 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm37981-201ENSMUST00000194280 535 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm38151-201ENSMUST00000195085 289 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm6450-201ENSMUST00000200896 574 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.71□□□□□ -0.53
Ebf1Q07802 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ebf1Q07802 Gm25201-201ENSMUST00000083093 170 ntBASIC11.71□□□□□ -0.53
Ebf1Q07802 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.54
Ebf1Q07802 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Ebf1Q07802 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.71□□□□□ -0.54
Ebf1Q07802 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Ebf1Q07802 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf1Q07802 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.7□□□□□ -0.54
Ebf1Q07802 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ebf1Q07802 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ebf1Q07802 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.7□□□□□ -0.54
Ebf1Q07802 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ebf1Q07802 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Gm23272-201ENSMUST00000104053 129 ntBASIC11.7□□□□□ -0.54
Ebf1Q07802 Gm25766-201ENSMUST00000104101 131 ntBASIC11.7□□□□□ -0.54
Ebf1Q07802 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Gm13047-201ENSMUST00000117116 815 ntBASIC11.7□□□□□ -0.54
Ebf1Q07802 Gm11801-201ENSMUST00000117807 746 ntBASIC11.7□□□□□ -0.54
Ebf1Q07802 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.7□□□□□ -0.54
Ebf1Q07802 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf1Q07802 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.7□□□□□ -0.54
Ebf1Q07802 Gm29410-201ENSMUST00000188383 694 ntBASIC11.7□□□□□ -0.54
Ebf1Q07802 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms