Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.1□□□□□ -0.63
Sox3P53784 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Gm44158-201ENSMUST00000203881 505 ntBASIC11.1□□□□□ -0.63
Sox3P53784 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Gm18204-201ENSMUST00000209835 793 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Gm2875-201ENSMUST00000211333 360 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Gm4157-201ENSMUST00000211647 679 ntBASIC11.1□□□□□ -0.63
Sox3P53784 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.1□□□□□ -0.63
Sox3P53784 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Sox3P53784 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.1□□□□□ -0.63
Sox3P53784 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox3P53784 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox3P53784 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Sox3P53784 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Sox3P53784 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox3P53784 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sox3P53784 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox3P53784 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.09□□□□□ -0.63
Sox3P53784 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sox3P53784 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sox3P53784 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Gm24231-201ENSMUST00000104315 133 ntBASIC11.09□□□□□ -0.63
Sox3P53784 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox3P53784 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Gm15352-201ENSMUST00000118696 270 ntBASIC11.09□□□□□ -0.63
Sox3P53784 Gm15703-201ENSMUST00000120250 880 ntBASIC11.09□□□□□ -0.63
Sox3P53784 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.09□□□□□ -0.63
Sox3P53784 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Gm3619-201ENSMUST00000219947 775 ntBASIC11.09□□□□□ -0.63
Sox3P53784 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sox3P53784 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
Sox3P53784 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sox3P53784 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox3P53784 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox3P53784 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox3P53784 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.08□□□□□ -0.63
Sox3P53784 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sox3P53784 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox3P53784 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
Sox3P53784 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.08□□□□□ -0.64
Sox3P53784 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox3P53784 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms