Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.75□□□□□ -0.69
Sox2P48432 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Sox2P48432 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.75□□□□□ -0.69
Sox2P48432 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.75□□□□□ -0.69
Sox2P48432 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.75□□□□□ -0.69
Sox2P48432 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Gm26956-201ENSMUST00000182176 986 ntBASIC10.75□□□□□ -0.69
Sox2P48432 Gm5745-201ENSMUST00000183748 313 ntBASIC10.75□□□□□ -0.69
Sox2P48432 Gm37489-201ENSMUST00000191883 159 ntBASIC10.75□□□□□ -0.69
Sox2P48432 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Gm10608-202ENSMUST00000213924 676 ntBASIC10.75□□□□□ -0.69
Sox2P48432 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.75□□□□□ -0.69
Sox2P48432 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sox2P48432 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sox2P48432 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox2P48432 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sox2P48432 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.75□□□□□ -0.69
Sox2P48432 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sox2P48432 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.75□□□□□ -0.69
Sox2P48432 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox2P48432 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox2P48432 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.74□□□□□ -0.69
Sox2P48432 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox2P48432 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Sox2P48432 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sox2P48432 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.74□□□□□ -0.69
Sox2P48432 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sox2P48432 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Gm11511-201ENSMUST00000118146 540 ntBASIC10.74□□□□□ -0.69
Sox2P48432 Gm11793-201ENSMUST00000120433 981 ntBASIC10.74□□□□□ -0.69
Sox2P48432 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.74□□□□□ -0.69
Sox2P48432 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.74□□□□□ -0.69
Sox2P48432 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.74□□□□□ -0.69
Sox2P48432 Gm18187-201ENSMUST00000196476 984 ntBASIC10.74□□□□□ -0.69
Sox2P48432 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox2P48432 Gm19187-201ENSMUST00000206781 892 ntBASIC10.74□□□□□ -0.69
Sox2P48432 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Gm5455-201ENSMUST00000058710 715 ntBASIC10.74□□□□□ -0.69
Sox2P48432 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sox2P48432 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sox2P48432 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sox2P48432 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox2P48432 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.74□□□□□ -0.69
Sox2P48432 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox2P48432 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.74□□□□□ -0.69
Sox2P48432 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.74□□□□□ -0.69
Sox2P48432 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox2P48432 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sox2P48432 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox2P48432 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms