Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfc1P35601 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Rfc1P35601 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.13□□□□□ -0.47
Rfc1P35601 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Gm14999-201ENSMUST00000121039 624 ntBASIC12.13□□□□□ -0.47
Rfc1P35601 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.13□□□□□ -0.47
Rfc1P35601 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.13□□□□□ -0.47
Rfc1P35601 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.13□□□□□ -0.47
Rfc1P35601 Gm807-202ENSMUST00000224929 408 ntBASIC12.13□□□□□ -0.47
Rfc1P35601 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Rfc1P35601 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rfc1P35601 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.13□□□□□ -0.47
Rfc1P35601 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.13□□□□□ -0.47
Rfc1P35601 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Gm21039-201ENSMUST00000223359 2012 ntBASIC12.13□□□□□ -0.47
Rfc1P35601 Nln-205ENSMUST00000224945 2486 ntBASIC12.13□□□□□ -0.47
Rfc1P35601 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rfc1P35601 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfc1P35601 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.13□□□□□ -0.47
Rfc1P35601 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Rfc1P35601 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
Rfc1P35601 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfc1P35601 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Rfc1P35601 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Gm24934-201ENSMUST00000103764 111 ntBASIC12.12□□□□□ -0.47
Rfc1P35601 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Rfc1P35601 Gm5187-201ENSMUST00000117317 991 ntBASIC12.12□□□□□ -0.47
Rfc1P35601 Gm6023-201ENSMUST00000118217 606 ntBASIC12.12□□□□□ -0.47
Rfc1P35601 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.12□□□□□ -0.47
Rfc1P35601 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.12□□□□□ -0.47
Rfc1P35601 Gm13316-201ENSMUST00000140537 691 ntBASIC12.12□□□□□ -0.47
Rfc1P35601 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfc1P35601 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rfc1P35601 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Rfc1P35601 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rfc1P35601 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rfc1P35601 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rfc1P35601 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rfc1P35601 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfc1P35601 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rfc1P35601 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfc1P35601 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms