Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm18061-201ENSMUST00000208350 562 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm18063-201ENSMUST00000208529 568 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm18052-201ENSMUST00000208750 559 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf1aP25118 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.87
Tnfrsf1aP25118 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Gm11439-201ENSMUST00000118598 409 ntBASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Gm15808-201ENSMUST00000119046 604 ntBASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Gm807-202ENSMUST00000224929 408 ntBASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf1aP25118 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf1aP25118 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms