Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RarbP22605 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RarbP22605 Pck2-205ENSMUST00000226352 2784 ntBASIC12.77□□□□□ -0.36
RarbP22605 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RarbP22605 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RarbP22605 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RarbP22605 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.77□□□□□ -0.37
RarbP22605 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RarbP22605 Gm13445-201ENSMUST00000121664 307 ntBASIC12.77□□□□□ -0.37
RarbP22605 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RarbP22605 Gm18776-201ENSMUST00000188833 654 ntBASIC12.77□□□□□ -0.37
RarbP22605 Gm37284-201ENSMUST00000193607 539 ntBASIC12.77□□□□□ -0.37
RarbP22605 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.77□□□□□ -0.37
RarbP22605 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.77□□□□□ -0.37
RarbP22605 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RarbP22605 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RarbP22605 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
RarbP22605 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
RarbP22605 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.76□□□□□ -0.37
RarbP22605 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.76□□□□□ -0.37
RarbP22605 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.76□□□□□ -0.37
RarbP22605 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.76□□□□□ -0.37
RarbP22605 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Gm8197-202ENSMUST00000193422 934 ntBASIC12.76□□□□□ -0.37
RarbP22605 Gm5870-201ENSMUST00000196461 282 ntBASIC12.76□□□□□ -0.37
RarbP22605 Gm42779-201ENSMUST00000198807 406 ntBASIC12.76□□□□□ -0.37
RarbP22605 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.76□□□□□ -0.37
RarbP22605 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.76□□□□□ -0.37
RarbP22605 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RarbP22605 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.76□□□□□ -0.37
RarbP22605 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.76□□□□□ -0.37
RarbP22605 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RarbP22605 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
RarbP22605 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RarbP22605 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
RarbP22605 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RarbP22605 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RarbP22605 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RarbP22605 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RarbP22605 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RarbP22605 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RarbP22605 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RarbP22605 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RarbP22605 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
RarbP22605 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RarbP22605 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.75□□□□□ -0.37
RarbP22605 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.75□□□□□ -0.37
RarbP22605 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RarbP22605 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.75□□□□□ -0.37
RarbP22605 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.75□□□□□ -0.37
RarbP22605 Gm11578-201ENSMUST00000118530 459 ntBASIC12.75□□□□□ -0.37
RarbP22605 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.75□□□□□ -0.37
RarbP22605 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.75□□□□□ -0.37
RarbP22605 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms