Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
UbbP0CG49 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
UbbP0CG49 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
UbbP0CG49 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
UbbP0CG49 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
UbbP0CG49 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Gm13786-201ENSMUST00000122371 333 ntBASIC10.02□□□□□ -0.81
UbbP0CG49 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.02□□□□□ -0.81
UbbP0CG49 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
UbbP0CG49 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.02□□□□□ -0.81
UbbP0CG49 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
UbbP0CG49 Gm3096-201ENSMUST00000185770 364 ntBASIC10.02□□□□□ -0.81
UbbP0CG49 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.02□□□□□ -0.81
UbbP0CG49 Gm4607-201ENSMUST00000206649 577 ntBASIC10.02□□□□□ -0.81
UbbP0CG49 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.02□□□□□ -0.81
UbbP0CG49 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.02□□□□□ -0.81
UbbP0CG49 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.02□□□□□ -0.81
UbbP0CG49 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UbbP0CG49 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
UbbP0CG49 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.01□□□□□ -0.81
UbbP0CG49 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.01□□□□□ -0.81
UbbP0CG49 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.01□□□□□ -0.81
UbbP0CG49 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm11222-201ENSMUST00000119005 738 ntBASIC10.01□□□□□ -0.81
UbbP0CG49 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm11793-201ENSMUST00000120433 981 ntBASIC10.01□□□□□ -0.81
UbbP0CG49 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.01□□□□□ -0.81
UbbP0CG49 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
UbbP0CG49 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.01□□□□□ -0.81
UbbP0CG49 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.01□□□□□ -0.81
UbbP0CG49 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm8712-201ENSMUST00000221090 701 ntBASIC10.01□□□□□ -0.81
UbbP0CG49 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
UbbP0CG49 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
UbbP0CG49 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
UbbP0CG49 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
UbbP0CG49 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UbbP0CG49 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
UbbP0CG49 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
UbbP0CG49 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10□□□□□ -0.81
UbbP0CG49 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
UbbP0CG49 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
UbbP0CG49 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
UbbP0CG49 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
UbbP0CG49 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
UbbP0CG49 Gm15004-201ENSMUST00000119192 630 ntBASIC10□□□□□ -0.81
UbbP0CG49 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10□□□□□ -0.81
UbbP0CG49 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms