Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.9□□□□□ -0.66
ApoeP08226 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
ApoeP08226 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.9□□□□□ -0.66
ApoeP08226 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.9□□□□□ -0.66
ApoeP08226 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Mospd4-201ENSMUST00000180618 576 ntBASIC10.9□□□□□ -0.66
ApoeP08226 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.9□□□□□ -0.66
ApoeP08226 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ApoeP08226 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.9□□□□□ -0.66
ApoeP08226 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.9□□□□□ -0.66
ApoeP08226 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ApoeP08226 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ApoeP08226 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ApoeP08226 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ApoeP08226 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ApoeP08226 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.9□□□□□ -0.66
ApoeP08226 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ApoeP08226 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ApoeP08226 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
ApoeP08226 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
ApoeP08226 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
ApoeP08226 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
ApoeP08226 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ApoeP08226 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
ApoeP08226 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
ApoeP08226 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
ApoeP08226 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
ApoeP08226 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
ApoeP08226 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.9□□□□□ -0.67
ApoeP08226 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ApoeP08226 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
ApoeP08226 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
ApoeP08226 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
ApoeP08226 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.89□□□□□ -0.67
ApoeP08226 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.89□□□□□ -0.67
ApoeP08226 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Gm27731-201ENSMUST00000185192 107 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.89□□□□□ -0.67
ApoeP08226 Gm38158-201ENSMUST00000194617 339 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Gm2553-201ENSMUST00000215986 605 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.89□□□□□ -0.67
ApoeP08226 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Gm10312-201ENSMUST00000078515 489 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ApoeP08226 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.89□□□□□ -0.67
ApoeP08226 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.89□□□□□ -0.67
ApoeP08226 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
ApoeP08226 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.89□□□□□ -0.67
ApoeP08226 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ApoeP08226 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.88□□□□□ -0.67
ApoeP08226 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.88□□□□□ -0.67
ApoeP08226 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ApoeP08226 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
ApoeP08226 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms