Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smarce1O54941 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.66□□□□□ -0.22
Smarce1O54941 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.66□□□□□ -0.22
Smarce1O54941 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smarce1O54941 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Gm11509-201ENSMUST00000117358 325 ntBASIC13.66□□□□□ -0.22
Smarce1O54941 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Gm25700-201ENSMUST00000177693 110 ntBASIC13.66□□□□□ -0.22
Smarce1O54941 Mir7677-201ENSMUST00000184226 67 ntBASIC13.66□□□□□ -0.22
Smarce1O54941 Gm44364-201ENSMUST00000198368 141 ntBASIC13.66□□□□□ -0.22
Smarce1O54941 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.66□□□□□ -0.22
Smarce1O54941 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Gm45224-201ENSMUST00000208203 414 ntBASIC13.66□□□□□ -0.22
Smarce1O54941 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Btrc-209ENSMUST00000224478 2194 ntBASIC13.66□□□□□ -0.22
Smarce1O54941 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarce1O54941 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarce1O54941 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.65□□□□□ -0.22
Smarce1O54941 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarce1O54941 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarce1O54941 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.65□□□□□ -0.22
Smarce1O54941 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Gm11783-201ENSMUST00000119549 885 ntBASIC13.65□□□□□ -0.22
Smarce1O54941 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC13.65□□□□□ -0.22
Smarce1O54941 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Gm38341-201ENSMUST00000195357 515 ntBASIC13.65□□□□□ -0.22
Smarce1O54941 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.65□□□□□ -0.22
Smarce1O54941 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Smarce1O54941 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.65□□□□□ -0.22
Smarce1O54941 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms