Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm13369-201ENSMUST00000119442 987 ntBASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm38671-201ENSMUST00000200573 130 ntBASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gm8463-201ENSMUST00000208573 613 ntBASIC10.29□□□□□ -0.76
Trem1Q9JKE2 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trem1Q9JKE2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms