Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ube4bQ9ES00 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Gm8602-201ENSMUST00000184045 607 ntBASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.05□□□□□ -0.64
Ube4bQ9ES00 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Gm40466-201ENSMUST00000212174 422 ntBASIC11.05□□□□□ -0.64
Ube4bQ9ES00 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ube4bQ9ES00 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms