Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmgn3Q9DCB1 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmgn3Q9DCB1 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Gm1335-201ENSMUST00000121653 386 ntBASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Mir1896-201ENSMUST00000122641 81 ntBASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Gm3329-201ENSMUST00000159873 556 ntBASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmgn3Q9DCB1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms