Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm14071-201ENSMUST00000117817 509 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm11475-201ENSMUST00000118482 476 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm14034-201ENSMUST00000120147 551 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm11960-201ENSMUST00000122068 925 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm8384-201ENSMUST00000190905 704 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm45481-201ENSMUST00000209717 877 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm9102-201ENSMUST00000219250 465 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm6478-201ENSMUST00000099450 742 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Cldnd1Q9CQX5 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Gm15374-201ENSMUST00000119313 844 ntBASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Gm15136-201ENSMUST00000120552 533 ntBASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Gm13284-201ENSMUST00000121020 547 ntBASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Gm31274-201ENSMUST00000197356 229 ntBASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cldnd1Q9CQX5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms