Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gm13097-201ENSMUST00000210722 397 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk5rap3Q99LM2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm25700-201ENSMUST00000177693 110 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm38317-201ENSMUST00000195564 343 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm43184-201ENSMUST00000197247 542 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm7940-201ENSMUST00000218195 769 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdk5rap3Q99LM2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm24255-201ENSMUST00000104481 128 ntBASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm11509-201ENSMUST00000117358 325 ntBASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm14071-201ENSMUST00000117817 509 ntBASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdk5rap3Q99LM2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms