Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm10254-201ENSMUST00000052888 867 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm15207-201ENSMUST00000119259 442 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm28071-201ENSMUST00000190355 478 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm43966-201ENSMUST00000203301 612 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.16□□□□□ -0.62
Cstf3Q99LI7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cstf3Q99LI7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Gm807-202ENSMUST00000224929 408 ntBASIC11.15□□□□□ -0.62
Cstf3Q99LI7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms