Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm11941-201ENSMUST00000119904 610 ntBASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm5363-201ENSMUST00000211927 938 ntBASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm5369-201ENSMUST00000217499 588 ntBASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Ntng1-201ENSMUST00000051253 327 ntBASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb1Q91Y08 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Btrc-209ENSMUST00000224478 2194 ntBASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Gm8731-201ENSMUST00000118088 412 ntBASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Gm3150-201ENSMUST00000166418 204 ntBASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Gm9540-201ENSMUST00000188230 478 ntBASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb1Q91Y08 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms