Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm13147-202ENSMUST00000177526 1173 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm21089-201ENSMUST00000215843 325 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm9257-201ENSMUST00000221254 232 ntBASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb3Q91XZ7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm24111-201ENSMUST00000175491 97 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm6222-202ENSMUST00000182143 629 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm43822-201ENSMUST00000200285 476 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr284-202ENSMUST00000206647 966 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm45299-202ENSMUST00000211011 765 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm18935-201ENSMUST00000212692 664 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm10617-201ENSMUST00000098368 1172 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb3Q91XZ7 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms