Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Gm11331-201ENSMUST00000119764 288 ntBASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga4Q91XY4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Gm11509-201ENSMUST00000117358 325 ntBASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Gm7851-201ENSMUST00000117574 323 ntBASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Gm15515-201ENSMUST00000117827 822 ntBASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 B9d1os-201ENSMUST00000137010 674 ntBASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Gm9797-202ENSMUST00000218003 294 ntBASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga4Q91XY4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga4Q91XY4 Gm15207-201ENSMUST00000119259 442 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms