Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
H1fooQ8VIK3 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm23949-201ENSMUST00000104027 127 ntBASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm26047-201ENSMUST00000157308 113 ntBASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm37666-201ENSMUST00000194110 866 ntBASIC9.67□□□□□ -0.86
H1fooQ8VIK3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm26047-202ENSMUST00000198840 115 ntBASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm7940-201ENSMUST00000218195 769 ntBASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
H1fooQ8VIK3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Gm23596-201ENSMUST00000104304 132 ntBASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Gm12857-201ENSMUST00000117678 592 ntBASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Gm12380-201ENSMUST00000119012 544 ntBASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.66□□□□□ -0.86
H1fooQ8VIK3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms