Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.43□□□□□ -0.42
TraipQ8VIG6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Gm43670-201ENSMUST00000199047 1767 ntBASIC12.43□□□□□ -0.42
TraipQ8VIG6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TraipQ8VIG6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TraipQ8VIG6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.42□□□□□ -0.42
TraipQ8VIG6 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm12795-201ENSMUST00000117594 539 ntBASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm14892-201ENSMUST00000117636 267 ntBASIC12.42□□□□□ -0.42
TraipQ8VIG6 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm20495-201ENSMUST00000173902 235 ntBASIC12.42□□□□□ -0.42
TraipQ8VIG6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.42□□□□□ -0.42
TraipQ8VIG6 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm23105-201ENSMUST00000083719 134 ntBASIC12.42□□□□□ -0.42
TraipQ8VIG6 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.42□□□□□ -0.42
TraipQ8VIG6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.42□□□□□ -0.42
TraipQ8VIG6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TraipQ8VIG6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Fam32a-201ENSMUST00000003123 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.41□□□□□ -0.42
TraipQ8VIG6 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Mir1956-201ENSMUST00000157748 65 ntBASIC12.41□□□□□ -0.42
TraipQ8VIG6 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Mir6998-201ENSMUST00000183343 64 ntBASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm37905-201ENSMUST00000195310 341 ntBASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm45276-201ENSMUST00000209549 1086 ntBASIC12.41□□□□□ -0.42
TraipQ8VIG6 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.41□□□□□ -0.42
TraipQ8VIG6 AC121870.2-201ENSMUST00000214343 1870 ntBASIC12.41□□□□□ -0.42
TraipQ8VIG6 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms