Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc38Q8CDN8 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Gm12380-201ENSMUST00000119012 544 ntBASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Gm15207-201ENSMUST00000119259 442 ntBASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Gm24749-201ENSMUST00000157838 343 ntBASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Mir7677-201ENSMUST00000184226 67 ntBASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Gm7003-201ENSMUST00000195089 312 ntBASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Gm43966-201ENSMUST00000203301 612 ntBASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc38Q8CDN8 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Gm3332-201ENSMUST00000189337 928 ntBASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Gm28071-201ENSMUST00000190355 478 ntBASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Gm807-202ENSMUST00000224929 408 ntBASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc38Q8CDN8 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms