Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm37835-201ENSMUST00000193305 361 ntBASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm6905-201ENSMUST00000205729 511 ntBASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm6722-201ENSMUST00000221586 390 ntBASIC12.7□□□□□ -0.38
Trim9Q8C7M3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim9Q8C7M3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Gm12247-201ENSMUST00000117585 670 ntBASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.69□□□□□ -0.38
Trim9Q8C7M3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim9Q8C7M3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Gm14193-201ENSMUST00000105067 153 ntBASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Gm7504-201ENSMUST00000201449 424 ntBASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim9Q8C7M3 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Gm1821-202ENSMUST00000227415 750 ntBASIC12.68□□□□□ -0.38
Trim9Q8C7M3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms