Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.34□□□□□ -0.75
Rft1Q8C3B8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 AA914427-201ENSMUST00000193194 1166 ntBASIC10.34□□□□□ -0.75
Rft1Q8C3B8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.34□□□□□ -0.75
Rft1Q8C3B8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.34□□□□□ -0.75
Rft1Q8C3B8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.34□□□□□ -0.75
Rft1Q8C3B8 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.75
Rft1Q8C3B8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Gm44651-201ENSMUST00000207343 372 ntBASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rft1Q8C3B8 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms