Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 AC134537.1-201ENSMUST00000219205 265 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col16a1Q8BLX7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 AC154354.1-203ENSMUST00000225565 1364 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm14592-201ENSMUST00000117201 560 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm11380-201ENSMUST00000118067 560 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Cd9-ps-201ENSMUST00000174687 650 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 n-R5s130-201ENSMUST00000178128 119 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm24312-201ENSMUST00000178677 119 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 n-R5s106-201ENSMUST00000179060 119 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 n-R5s118-201ENSMUST00000179887 119 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Mir6359-201ENSMUST00000183668 81 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm6677-201ENSMUST00000195100 441 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 AC159196.1-201ENSMUST00000225524 377 ntBASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col16a1Q8BLX7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 AC159810.1-201ENSMUST00000214838 1480 ntBASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Gm24294-201ENSMUST00000158295 277 ntBASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 AC154213.1-201ENSMUST00000228234 583 ntBASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col16a1Q8BLX7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.87□□□□□ -0.03
Col16a1Q8BLX7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms