Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Gm6114-201ENSMUST00000182472 968 ntBASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Gm9358-201ENSMUST00000183067 927 ntBASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Gm7600-201ENSMUST00000209657 785 ntBASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Gm11451-201ENSMUST00000118946 630 ntBASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Gm18367-201ENSMUST00000176139 600 ntBASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Gm21092-201ENSMUST00000178995 955 ntBASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh8Q7TSK3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh8Q7TSK3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms