Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ctdp1Q7TSG2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ctdp1Q7TSG2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ctdp1Q7TSG2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ctdp1Q7TSG2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ctdp1Q7TSG2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Gm8885-201ENSMUST00000189382 598 ntBASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ctdp1Q7TSG2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Btrc-209ENSMUST00000224478 2194 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Gm13665-201ENSMUST00000120830 528 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Gm38317-201ENSMUST00000195564 343 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Gm38314-201ENSMUST00000195709 625 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Gm8712-201ENSMUST00000221090 701 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Gm10312-201ENSMUST00000078515 489 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ctdp1Q7TSG2 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ctdp1Q7TSG2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms