Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nphp3Q7TNH6 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Gm15615-201ENSMUST00000118876 198 ntBASIC14□□□□□ -0.17
Nphp3Q7TNH6 Gm15549-201ENSMUST00000121595 622 ntBASIC14□□□□□ -0.17
Nphp3Q7TNH6 Gm6548-201ENSMUST00000167498 1165 ntBASIC14□□□□□ -0.17
Nphp3Q7TNH6 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14□□□□□ -0.17
Nphp3Q7TNH6 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Gm23105-201ENSMUST00000083719 134 ntBASIC14□□□□□ -0.17
Nphp3Q7TNH6 Gm8420-201ENSMUST00000097103 598 ntBASIC14□□□□□ -0.17
Nphp3Q7TNH6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14□□□□□ -0.17
Nphp3Q7TNH6 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nphp3Q7TNH6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Gm12899-201ENSMUST00000120565 551 ntBASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Gm44329-201ENSMUST00000197469 112 ntBASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Gm43002-201ENSMUST00000200310 155 ntBASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nphp3Q7TNH6 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms