Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm24891-201ENSMUST00000104391 136 ntBASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm14724-201ENSMUST00000118400 537 ntBASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm8100-201ENSMUST00000182906 988 ntBASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 AU022133-201ENSMUST00000200601 873 ntBASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.26□□□□□ -0.45
Syne3Q4FZC9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Syne3Q4FZC9 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gm15207-201ENSMUST00000119259 442 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gm23085-201ENSMUST00000157849 293 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gm18734-201ENSMUST00000172937 808 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms