Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Cks1brtQ3UNC9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Cks1brtQ3UNC9 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Cks1brtQ3UNC9 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm13453-201ENSMUST00000118708 357 ntBASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm13326-201ENSMUST00000118730 1011 ntBASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm11597-201ENSMUST00000121423 964 ntBASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm23119-201ENSMUST00000158610 140 ntBASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm43692-201ENSMUST00000198236 1062 ntBASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Cks1brtQ3UNC9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Gm2606-201ENSMUST00000100754 1002 ntBASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Gm12286-201ENSMUST00000119246 1002 ntBASIC8.22□□□□□ -1.09
Cks1brtQ3UNC9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms