Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm29808-201ENSMUST00000194419 468 ntBASIC13.56□□□□□ -0.24
Col5a2Q3U962 Gm19918-201ENSMUST00000194858 400 ntBASIC13.56□□□□□ -0.24
Col5a2Q3U962 Gm33707-201ENSMUST00000195135 569 ntBASIC13.56□□□□□ -0.24
Col5a2Q3U962 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.56□□□□□ -0.24
Col5a2Q3U962 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC13.56□□□□□ -0.24
Col5a2Q3U962 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13.56□□□□□ -0.24
Col5a2Q3U962 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.56□□□□□ -0.24
Col5a2Q3U962 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col5a2Q3U962 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm16209-201ENSMUST00000118457 627 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm10171-201ENSMUST00000126220 628 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm8226-201ENSMUST00000190511 798 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm10233-201ENSMUST00000089275 628 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 AC166361.2-201ENSMUST00000219269 1415 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm22495-201ENSMUST00000104492 126 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm11700-201ENSMUST00000119409 403 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm27826-201ENSMUST00000175282 255 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 AC117769.1-201ENSMUST00000224716 1120 ntBASIC13.55□□□□□ -0.24
Col5a2Q3U962 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col5a2Q3U962 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms