Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Gm42693-201ENSMUST00000196779 631 ntBASIC9.44□□□□□ -0.9
Trim63Q38HM4 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Gm44771-201ENSMUST00000206975 626 ntBASIC9.44□□□□□ -0.9
Trim63Q38HM4 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Gm10254-201ENSMUST00000052888 867 ntBASIC9.44□□□□□ -0.9
Trim63Q38HM4 Gm24136-201ENSMUST00000083374 165 ntBASIC9.44□□□□□ -0.9
Trim63Q38HM4 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.44□□□□□ -0.9
Trim63Q38HM4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC9.44□□□□□ -0.9
Trim63Q38HM4 Adamtsl1-209ENSMUST00000141889 7805 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Gm37145-201ENSMUST00000193540 2756 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Gm43288-201ENSMUST00000197594 2628 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Gm43457-201ENSMUST00000200867 2409 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Mir1897-201ENSMUST00000122581 272 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Rmrp-201ENSMUST00000157463 271 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 Gm28064-201ENSMUST00000185639 858 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Slc25a45-201ENSMUST00000025732 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 CT572985.1-201ENSMUST00000220599 4714 ntBASIC9.43□□□□□ -0.9
Trim63Q38HM4 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim63Q38HM4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim63Q38HM4 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC9.42□□□□□ -0.9
Trim63Q38HM4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms