Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trpm1Q2TV84 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 AC155245.1-201ENSMUST00000222266 1804 ntBASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Gm13426-201ENSMUST00000117887 795 ntBASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Gm19027-201ENSMUST00000187291 1355 ntBASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trpm1Q2TV84 Gm42829-201ENSMUST00000198417 2585 ntBASIC16.02■□□□□ 0.15
Trpm1Q2TV84 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trpm1Q2TV84 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trpm1Q2TV84 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trpm1Q2TV84 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm12684-201ENSMUST00000118675 999 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm16441-201ENSMUST00000138176 924 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 AC241616.1-201ENSMUST00000213741 166 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 AC133496.1-201ENSMUST00000223891 743 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm29245-201ENSMUST00000187332 1416 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm42858-201ENSMUST00000202512 1704 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 AC153524.2-202ENSMUST00000220401 1794 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm6038-201ENSMUST00000154310 948 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm17782-201ENSMUST00000174345 880 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm2474-201ENSMUST00000195162 559 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm9619-201ENSMUST00000211587 762 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 AC134860.2-201ENSMUST00000225277 1036 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Gm10581-201ENSMUST00000097986 231 ntBASIC16.01■□□□□ 0.15
Trpm1Q2TV84 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trpm1Q2TV84 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trpm1Q2TV84 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trpm1Q2TV84 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trpm1Q2TV84 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC16■□□□□ 0.15
Trpm1Q2TV84 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Gm12716-201ENSMUST00000120606 1354 ntBASIC16■□□□□ 0.15
Trpm1Q2TV84 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trpm1Q2TV84 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms