Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm6114-201ENSMUST00000182472 968 ntBASIC10.44□□□□□ -0.74
Lsm3P62311 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm44855-201ENSMUST00000205725 362 ntBASIC10.44□□□□□ -0.74
Lsm3P62311 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Lsm3P62311 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.44□□□□□ -0.74
Lsm3P62311 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Lsm3P62311 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lsm3P62311 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.43□□□□□ -0.74
Lsm3P62311 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Lsm3P62311 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.43□□□□□ -0.74
Lsm3P62311 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lsm3P62311 Gm38241-201ENSMUST00000192641 898 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.43□□□□□ -0.74
Lsm3P62311 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lsm3P62311 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.43□□□□□ -0.74
Lsm3P62311 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Lsm3P62311 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Nln-205ENSMUST00000224945 2486 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lsm3P62311 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.43□□□□□ -0.74
Lsm3P62311 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm3P62311 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm3P62311 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm3P62311 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms