Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.15□□□□□ -0.46
NcanP55066 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NcanP55066 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NcanP55066 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NcanP55066 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
NcanP55066 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.15□□□□□ -0.47
NcanP55066 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NcanP55066 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NcanP55066 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Gm8968-201ENSMUST00000199133 1303 ntBASIC12.14□□□□□ -0.47
NcanP55066 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.14□□□□□ -0.47
NcanP55066 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC12.14□□□□□ -0.47
NcanP55066 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.14□□□□□ -0.47
NcanP55066 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NcanP55066 Mir1249-201ENSMUST00000116791 98 ntBASIC12.14□□□□□ -0.47
NcanP55066 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Gm7805-201ENSMUST00000154348 448 ntBASIC12.14□□□□□ -0.47
NcanP55066 Gm26119-201ENSMUST00000175601 104 ntBASIC12.14□□□□□ -0.47
NcanP55066 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.14□□□□□ -0.47
NcanP55066 Gm24312-201ENSMUST00000178677 119 ntBASIC12.14□□□□□ -0.47
NcanP55066 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.14□□□□□ -0.47
NcanP55066 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.14□□□□□ -0.47
NcanP55066 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC12.14□□□□□ -0.47
NcanP55066 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12.14□□□□□ -0.47
NcanP55066 Gm19918-201ENSMUST00000194858 400 ntBASIC12.14□□□□□ -0.47
NcanP55066 Gm43117-201ENSMUST00000198531 379 ntBASIC12.14□□□□□ -0.47
NcanP55066 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.14□□□□□ -0.47
NcanP55066 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.14□□□□□ -0.47
NcanP55066 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NcanP55066 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.14□□□□□ -0.47
NcanP55066 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NcanP55066 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NcanP55066 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.14□□□□□ -0.47
NcanP55066 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.14□□□□□ -0.47
NcanP55066 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NcanP55066 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NcanP55066 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NcanP55066 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NcanP55066 Gm22495-201ENSMUST00000104492 126 ntBASIC12.13□□□□□ -0.47
NcanP55066 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.13□□□□□ -0.47
NcanP55066 Gm12774-201ENSMUST00000117881 416 ntBASIC12.13□□□□□ -0.47
NcanP55066 Gm8302-201ENSMUST00000119217 852 ntBASIC12.13□□□□□ -0.47
NcanP55066 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.13□□□□□ -0.47
NcanP55066 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.13□□□□□ -0.47
NcanP55066 Gm11960-201ENSMUST00000122068 925 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms