Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.55□□□□□ -0.88
Nkx2-1P50220 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.55□□□□□ -0.88
Nkx2-1P50220 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gm6439-201ENSMUST00000199849 862 ntBASIC9.55□□□□□ -0.88
Nkx2-1P50220 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gm19994-201ENSMUST00000217086 586 ntBASIC9.55□□□□□ -0.88
Nkx2-1P50220 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.55□□□□□ -0.88
Nkx2-1P50220 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm6023-201ENSMUST00000118217 606 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm12164-201ENSMUST00000121695 551 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm18893-201ENSMUST00000198416 943 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.54□□□□□ -0.88
Nkx2-1P50220 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nkx2-1P50220 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx2-1P50220 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx2-1P50220 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Nkx2-1P50220 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx2-1P50220 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx2-1P50220 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx2-1P50220 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms