Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.1□□□□□ -0.63
Prox1P48437 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Prox1P48437 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.1□□□□□ -0.63
Prox1P48437 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prox1P48437 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.09□□□□□ -0.63
Prox1P48437 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Prox1P48437 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Prox1P48437 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Prox1P48437 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Prox1P48437 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Prox1P48437 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.09□□□□□ -0.63
Prox1P48437 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Prox1P48437 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.09□□□□□ -0.63
Prox1P48437 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.09□□□□□ -0.63
Prox1P48437 Mospd4-201ENSMUST00000180618 576 ntBASIC11.09□□□□□ -0.63
Prox1P48437 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.09□□□□□ -0.63
Prox1P48437 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.09□□□□□ -0.63
Prox1P48437 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Prox1P48437 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Prox1P48437 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.09□□□□□ -0.63
Prox1P48437 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.09□□□□□ -0.63
Prox1P48437 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.09□□□□□ -0.63
Prox1P48437 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Prox1P48437 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Prox1P48437 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Prox1P48437 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Prox1P48437 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.09□□□□□ -0.63
Prox1P48437 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Prox1P48437 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.09□□□□□ -0.63
Prox1P48437 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Prox1P48437 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Prox1P48437 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Prox1P48437 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Prox1P48437 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.08□□□□□ -0.64
Prox1P48437 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Prox1P48437 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.08□□□□□ -0.64
Prox1P48437 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.08□□□□□ -0.64
Prox1P48437 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Gm14723-201ENSMUST00000118686 215 ntBASIC11.08□□□□□ -0.64
Prox1P48437 Gm24845-201ENSMUST00000158034 109 ntBASIC11.08□□□□□ -0.64
Prox1P48437 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Prox1P48437 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.08□□□□□ -0.64
Prox1P48437 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Prox1P48437 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Prox1P48437 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Prox1P48437 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.08□□□□□ -0.64
Prox1P48437 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Prox1P48437 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms