Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm12591-201ENSMUST00000122407 1177 ntBASIC11.35□□□□□ -0.59
Sox18P43680 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox18P43680 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.35□□□□□ -0.59
Sox18P43680 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.35□□□□□ -0.59
Sox18P43680 Gm9507-202ENSMUST00000180157 654 ntBASIC11.35□□□□□ -0.59
Sox18P43680 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Sox18P43680 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11.35□□□□□ -0.59
Sox18P43680 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Sox18P43680 Gm42591-201ENSMUST00000197249 700 ntBASIC11.35□□□□□ -0.59
Sox18P43680 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.35□□□□□ -0.59
Sox18P43680 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.35□□□□□ -0.59
Sox18P43680 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox18P43680 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox18P43680 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox18P43680 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox18P43680 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Sox18P43680 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.35□□□□□ -0.59
Sox18P43680 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox18P43680 Gm44509-201ENSMUST00000205400 1324 ntBASIC11.35□□□□□ -0.59
Sox18P43680 Gm44746-201ENSMUST00000205565 1349 ntBASIC11.35□□□□□ -0.59
Sox18P43680 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox18P43680 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox18P43680 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Sox18P43680 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox18P43680 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Sox18P43680 Mir466f-3-201ENSMUST00000104788 94 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Gm14481-201ENSMUST00000117178 629 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Gm13351-201ENSMUST00000118087 414 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Gm15207-201ENSMUST00000119259 442 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Gm11660-201ENSMUST00000120955 412 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox18P43680 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox18P43680 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.34□□□□□ -0.59
Sox18P43680 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Gm12407-201ENSMUST00000180219 324 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox18P43680 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Gm5870-201ENSMUST00000196461 282 ntBASIC11.34□□□□□ -0.59
Sox18P43680 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Gm18514-201ENSMUST00000218980 436 ntBASIC11.34□□□□□ -0.59
Sox18P43680 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox18P43680 Gm40879-201ENSMUST00000220759 612 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC11.34□□□□□ -0.59
Sox18P43680 Gm34165-201ENSMUST00000222012 1174 ntBASIC11.34□□□□□ -0.59
Sox18P43680 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox18P43680 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox18P43680 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.34□□□□□ -0.59
Sox18P43680 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox18P43680 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Sox18P43680 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox18P43680 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox18P43680 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms