Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fen1P39749 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Fen1P39749 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.61□□□□□ -0.55
Fen1P39749 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.61□□□□□ -0.55
Fen1P39749 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Fen1P39749 Gm10608-202ENSMUST00000213924 676 ntBASIC11.61□□□□□ -0.55
Fen1P39749 Gm19994-201ENSMUST00000217086 586 ntBASIC11.61□□□□□ -0.55
Fen1P39749 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.61□□□□□ -0.55
Fen1P39749 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.61□□□□□ -0.55
Fen1P39749 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.61□□□□□ -0.55
Fen1P39749 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fen1P39749 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Fen1P39749 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Fen1P39749 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Fen1P39749 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Fen1P39749 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.6□□□□□ -0.55
Fen1P39749 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Fen1P39749 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Gm12241-201ENSMUST00000118330 726 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Gm11439-201ENSMUST00000118598 409 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Gm13350-201ENSMUST00000120519 479 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Fen1P39749 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Fen1P39749 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Fen1P39749 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Fen1P39749 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.6□□□□□ -0.55
Fen1P39749 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fen1P39749 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Fen1P39749 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fen1P39749 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Fen1P39749 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fen1P39749 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Fen1P39749 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fen1P39749 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fen1P39749 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fen1P39749 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fen1P39749 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fen1P39749 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms