Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.98□□□□□ -0.65
Slc6a11P31650 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.98□□□□□ -0.65
Slc6a11P31650 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Slc6a11P31650 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Slc6a11P31650 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Slc6a11P31650 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.98□□□□□ -0.65
Slc6a11P31650 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.98□□□□□ -0.65
Slc6a11P31650 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.98□□□□□ -0.65
Slc6a11P31650 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.98□□□□□ -0.65
Slc6a11P31650 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.98□□□□□ -0.65
Slc6a11P31650 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.98□□□□□ -0.65
Slc6a11P31650 Gm19459-201ENSMUST00000176240 835 ntBASIC10.98□□□□□ -0.65
Slc6a11P31650 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Gm44126-201ENSMUST00000204831 514 ntBASIC10.98□□□□□ -0.65
Slc6a11P31650 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.98□□□□□ -0.65
Slc6a11P31650 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Slc6a11P31650 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Slc6a11P31650 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Slc6a11P31650 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Gm12208-201ENSMUST00000122004 163 ntBASIC10.97□□□□□ -0.65
Slc6a11P31650 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Gm7848-201ENSMUST00000210739 718 ntBASIC10.97□□□□□ -0.65
Slc6a11P31650 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Slc6a11P31650 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a11P31650 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Slc6a11P31650 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.96□□□□□ -0.65
Slc6a11P31650 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Slc6a11P31650 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a11P31650 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms