Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm7046-201ENSMUST00000221351 977 ntBASIC9.95□□□□□ -0.82
Slc6a1P31648 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Slc6a1P31648 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Slc6a1P31648 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.95□□□□□ -0.82
Slc6a1P31648 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.94□□□□□ -0.82
Slc6a1P31648 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm13492-201ENSMUST00000119772 665 ntBASIC9.94□□□□□ -0.82
Slc6a1P31648 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm9257-201ENSMUST00000221254 232 ntBASIC9.94□□□□□ -0.82
Slc6a1P31648 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.94□□□□□ -0.82
Slc6a1P31648 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.94□□□□□ -0.82
Slc6a1P31648 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Slc6a1P31648 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.94□□□□□ -0.82
Slc6a1P31648 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.93□□□□□ -0.82
Slc6a1P31648 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.93□□□□□ -0.82
Slc6a1P31648 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Gm14723-201ENSMUST00000118686 215 ntBASIC9.93□□□□□ -0.82
Slc6a1P31648 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.93□□□□□ -0.82
Slc6a1P31648 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Gm21769-201ENSMUST00000211922 111 ntBASIC9.93□□□□□ -0.82
Slc6a1P31648 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms