Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.14□□□□□ -0.47
Zfp42P22227 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.14□□□□□ -0.47
Zfp42P22227 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.14□□□□□ -0.47
Zfp42P22227 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Zfp42P22227 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Zfp42P22227 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.14□□□□□ -0.47
Zfp42P22227 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.14□□□□□ -0.47
Zfp42P22227 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.14□□□□□ -0.47
Zfp42P22227 Rps4l-202ENSMUST00000204242 789 ntBASIC12.14□□□□□ -0.47
Zfp42P22227 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.14□□□□□ -0.47
Zfp42P22227 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.14□□□□□ -0.47
Zfp42P22227 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Zfp42P22227 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Zfp42P22227 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Zfp42P22227 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Zfp42P22227 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Zfp42P22227 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp42P22227 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.13□□□□□ -0.47
Zfp42P22227 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.13□□□□□ -0.47
Zfp42P22227 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Zfp42P22227 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.13□□□□□ -0.47
Zfp42P22227 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.13□□□□□ -0.47
Zfp42P22227 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Zfp42P22227 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.13□□□□□ -0.47
Zfp42P22227 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.13□□□□□ -0.47
Zfp42P22227 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Zfp42P22227 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Zfp42P22227 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp42P22227 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Zfp42P22227 Erich3-203ENSMUST00000189969 3460 ntBASIC12.12□□□□□ -0.47
Zfp42P22227 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Zfp42P22227 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Zfp42P22227 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp42P22227 Gm13296-201ENSMUST00000117854 997 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms