Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx1P18111 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx1P18111 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.37□□□□□ -0.91
Cdx1P18111 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.37□□□□□ -0.91
Cdx1P18111 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Cdx1P18111 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.37□□□□□ -0.91
Cdx1P18111 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.37□□□□□ -0.91
Cdx1P18111 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.37□□□□□ -0.91
Cdx1P18111 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.37□□□□□ -0.91
Cdx1P18111 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm6082-201ENSMUST00000215204 454 ntBASIC9.37□□□□□ -0.91
Cdx1P18111 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.37□□□□□ -0.91
Cdx1P18111 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.37□□□□□ -0.91
Cdx1P18111 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.37□□□□□ -0.91
Cdx1P18111 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx1P18111 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.37□□□□□ -0.91
Cdx1P18111 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx1P18111 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Cdx1P18111 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.36□□□□□ -0.91
Cdx1P18111 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cdx1P18111 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Cdx1P18111 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.36□□□□□ -0.91
Cdx1P18111 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cdx1P18111 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.36□□□□□ -0.91
Cdx1P18111 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Gm11978-201ENSMUST00000122315 466 ntBASIC9.36□□□□□ -0.91
Cdx1P18111 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.36□□□□□ -0.91
Cdx1P18111 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.36□□□□□ -0.91
Cdx1P18111 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.36□□□□□ -0.91
Cdx1P18111 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Cdx1P18111 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.36□□□□□ -0.91
Cdx1P18111 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.36□□□□□ -0.91
Cdx1P18111 Gm6458-201ENSMUST00000211573 635 ntBASIC9.36□□□□□ -0.91
Cdx1P18111 Gm18164-201ENSMUST00000213769 927 ntBASIC9.36□□□□□ -0.91
Cdx1P18111 Gm18166-201ENSMUST00000215557 927 ntBASIC9.36□□□□□ -0.91
Cdx1P18111 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx1P18111 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms