Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.67□□□□□ -0.7
TprF6ZDS4 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.67□□□□□ -0.7
TprF6ZDS4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.67□□□□□ -0.7
TprF6ZDS4 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm12906-201ENSMUST00000154610 441 ntBASIC10.67□□□□□ -0.7
TprF6ZDS4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm9204-201ENSMUST00000212641 947 ntBASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm5449-201ENSMUST00000081132 357 ntBASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm23105-201ENSMUST00000083719 134 ntBASIC10.67□□□□□ -0.7
TprF6ZDS4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.67□□□□□ -0.7
TprF6ZDS4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TprF6ZDS4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TprF6ZDS4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.67□□□□□ -0.7
TprF6ZDS4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
TprF6ZDS4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.66□□□□□ -0.7
TprF6ZDS4 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm15615-201ENSMUST00000118876 198 ntBASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm7504-201ENSMUST00000201449 424 ntBASIC10.66□□□□□ -0.7
TprF6ZDS4 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
TprF6ZDS4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
TprF6ZDS4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm23439-201ENSMUST00000104292 132 ntBASIC10.66□□□□□ -0.7
TprF6ZDS4 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm13204-201ENSMUST00000120110 821 ntBASIC10.66□□□□□ -0.7
TprF6ZDS4 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.66□□□□□ -0.7
TprF6ZDS4 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.66□□□□□ -0.7
TprF6ZDS4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TprF6ZDS4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
TprF6ZDS4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.66□□□□□ -0.7
TprF6ZDS4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.66□□□□□ -0.7
TprF6ZDS4 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms