Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm15573-201ENSMUST00000119487 540 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm13408-201ENSMUST00000119822 798 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm13935-201ENSMUST00000121859 798 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm9089-201ENSMUST00000122027 526 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm8737-201ENSMUST00000122208 642 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm18827-201ENSMUST00000188341 790 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm37981-201ENSMUST00000194280 535 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm43186-201ENSMUST00000198130 824 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm43138-201ENSMUST00000199123 708 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm44100-201ENSMUST00000204329 436 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Olfml3-204ENSMUST00000169286 874 ntBASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gm21092-201ENSMUST00000178995 955 ntBASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk3aQ9JKX8 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Upk3aQ9JKX8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms