Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Gm19165-201ENSMUST00000204453 1982 ntBASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Gm10463-202ENSMUST00000195772 2889 ntBASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush1cQ9ES64 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.24□□□□□ -0.29
Ush1cQ9ES64 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Gm18054-201ENSMUST00000207539 555 ntBASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush1cQ9ES64 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm12502-201ENSMUST00000120197 444 ntBASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm37008-201ENSMUST00000195712 319 ntBASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm44405-201ENSMUST00000198952 126 ntBASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm45925-201ENSMUST00000218882 744 ntBASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm45930-201ENSMUST00000221330 292 ntBASIC13.23□□□□□ -0.29
Ush1cQ9ES64 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Snora73a-201ENSMUST00000082453 205 ntBASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm10699-201ENSMUST00000098916 2130 ntBASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms