Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm13827-201ENSMUST00000148801 372 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm24078-201ENSMUST00000158184 103 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm6612-201ENSMUST00000170777 395 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm20495-201ENSMUST00000173902 235 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm31274-201ENSMUST00000197356 229 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm18123-201ENSMUST00000210874 822 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-4Q9EQM3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm15528-201ENSMUST00000117821 864 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm15707-201ENSMUST00000118804 996 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm24992-201ENSMUST00000157412 130 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm33707-201ENSMUST00000195135 569 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm18010-201ENSMUST00000203553 202 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm45310-201ENSMUST00000210436 275 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms