Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Gm5070-201ENSMUST00000177599 862 ntBASIC12.62□□□□□ -0.39
Ssr1Q9CY50 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Gm8036-201ENSMUST00000118089 1718 ntBASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssr1Q9CY50 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.62□□□□□ -0.39
Ssr1Q9CY50 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm11222-201ENSMUST00000119005 738 ntBASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm27046-201ENSMUST00000182160 463 ntBASIC12.61□□□□□ -0.39
Ssr1Q9CY50 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssr1Q9CY50 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms